Transcript: ENST00000568565.1 ADAMTS17-009

Description

ADAM metallopeptidase with thrombospondin type 1 motif, 17 [Source:HGNC Symbol;Acc:17109]

Gene Synonyms

FLJ16363, FLJ32769

Location

Chromosome 15: 100,591,773-100,649,312 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 33211 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSG00000140470.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268070.4	ADAMTS17-001	6207	1095aa	ENSP00000268070.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10383	Q8TE56	NM_139057.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561355.2	ADAMTS17-004	954	120aa	ENSP00000458005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568565.1	ADAMTS17-009	643	214aa	ENSP00000456161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000558960.1	ADAMTS17-002	571	68aa	ENSP00000453604.1	Nonsense mediated decay		H0YMH1	-	-
ENST00000559976.1	ADAMTS17-007	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560486.1	ADAMTS17-006	405	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558930.1	ADAMTS17-003	220	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000378898.4	ADAMTS17-005	1964	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557896.1	ADAMTS17-008	1745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 643 bps, Translation length: 214 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000568565.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000420577 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

Favourite species

All species

Recent locations

Transcript: ENST00000568565.1 ADAMTS17-009

Summary