Transcript: ENST00000558960.1 ADAMTS17-002

Description

ADAM metallopeptidase with thrombospondin type 1 motif, 17 [Source:HGNC Symbol;Acc:17109]

Gene Synonyms

FLJ16363, FLJ32769

Location

Chromosome 15: 100,802,594-100,882,210 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 41840 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSG00000140470.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268070.4	ADAMTS17-001	6207	1095aa	ENSP00000268070.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10383	Q8TE56	NM_139057.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561355.2	ADAMTS17-004	954	120aa	ENSP00000458005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568565.1	ADAMTS17-009	643	214aa	ENSP00000456161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000558960.1	ADAMTS17-002	571	68aa	ENSP00000453604.1	Nonsense mediated decay		H0YMH1	-	-
ENST00000559976.1	ADAMTS17-007	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560486.1	ADAMTS17-006	405	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558930.1	ADAMTS17-003	220	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000378898.4	ADAMTS17-005	1964	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557896.1	ADAMTS17-008	1745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 571 bps, Translation length: 68 residues

Version

ENST00000558960.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417545 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000558960.1 ADAMTS17-002

Summary