Transcript: ENST00000356231.3 CDAN1-001

Description

codanin 1 [Source:HGNC Symbol;Acc:1713]

Gene Synonyms

CDA-I, CDA1, CDAI, DLT, PRO1295

Location

About this transcript

This transcript has 28 exons, is annotated with 14 domains and features, is associated with 8579 variant alleles and maps to 758 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356231.3	CDAN1-001	4637	1227aa	ENSP00000348564.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32209	H3BM60 Q8IWY9	NM_138477.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563260.1	CDAN1-005	285	95aa	ENSP00000455536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPZ6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000562465.1	CDAN1-002	2562	347aa	ENSP00000454246.1	Nonsense mediated decay		H3BM60	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000563604.1	CDAN1-004	2076	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000565930.1	CDAN1-003	408	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 4,637 bps, Translation length: 1,227 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IWY9

CCDS

This transcript is a member of the Human CCDS set: CCDS32209

Version

ENST00000356231.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000431103 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.