Transcript: ENST00000558761.1 HDC-002

Description

histidine decarboxylase [Source:HGNC Symbol;Acc:4855]

Location

Chromosome 15: 50,545,117-50,557,923 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 5500 variant alleles and maps to 203 oligo probes.

Gene

This transcript is a product of gene ENSG00000140287.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000267845.3	HDC-001	2705	662aa	ENSP00000267845.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10134	P19113	NM_002112.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543581.1	HDC-004	2180	629aa	ENSP00000440252.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZM01	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559683.1	HDC-007	545	178aa	ENSP00000453183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLF0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559816.1	HDC-005	2046	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558679.1	HDC-003	1466	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558761.1	HDC-002	1333	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559190.1	HDC-008	1017	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,333 bps,

Version

ENST00000558761.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000418289 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000558761.1 HDC-002

Summary