Transcript: ENST00000556739.1 SLC24A4-004

Description

solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 [Source:HGNC Symbol;Acc:10978]

Gene Synonyms

NCKX4, SHEP6, SLC24A2

Location

Chromosome 14: 92,916,562-92,929,091 forward strand.

About this transcript

This transcript has 7 exons, is associated with 5473 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSG00000140090.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000532405.1	SLC24A4-001	4718	622aa	ENSP00000431840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9903	B4DHR5 G3V505 Q8NFF2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531433.1	SLC24A4-002	4531	603aa	ENSP00000433302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45155	G3V505 Q8NFF2	NM_153647.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000298877.1	SLC24A4-201	4465	605aa	ENSP00000298877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DHR5 G3V505 Q8NFF2	NM_153646.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393265.2	SLC24A4-003	4417	558aa	ENSP00000376948.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45156	B4DHR5 G3V505 Q8NFF2	NM_153648.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351924.5	SLC24A4-202	4408	586aa	ENSP00000337789.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V505 Q8NFF2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525557.1	SLC24A4-007	4187	464aa	ENSP00000432464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554461.1	SLC24A4-009	334	64aa	ENSP00000452099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V505	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556739.1	SLC24A4-004	3386	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526482.1	SLC24A4-005	4747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554925.1	SLC24A4-008	1616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 3,386 bps,

Version

ENST00000556739.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395243 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000556739.1 SLC24A4-004

Summary