Transcript: ENST00000339917.5 TSSK4-002

Description

testis-specific serine kinase 4 [Source:HGNC Symbol;Acc:19825]

Gene Synonyms

C14orf20, STK22E, TSK-4, TSK4, TSSK5

Location

Chromosome 14: 24,674,926-24,677,452 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 1277 variant alleles and maps to 294 oligo probes.

Gene

This transcript is a product of gene ENSG00000139908.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000339917.5	TSSK4-002	1321	338aa	ENSP00000339179.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53890	Q6SA08	NM_174944.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000287913.6	TSSK4-001	1257	328aa	ENSP00000287913.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9618	Q6SA08	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556621.1	TSSK4-003	896	252aa	ENSP00000452054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6SA08	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553766.1	TSSK4-005	725	108aa	ENSP00000450752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000555092.1	TSSK4-007	708	143aa	ENSP00000451121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000428351.2	TSSK4-006	576	135aa	ENSP00000412180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3J1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554420.1	TSSK4-004	1394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,321 bps, Translation length: 338 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6SA08

CCDS

This transcript is a member of the Human CCDS set: CCDS53890

Version

ENST00000339917.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000073140 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000339917.5 TSSK4-002

Summary