Transcript: ENST00000465068.1 NUPL1-014

Description

nucleoporin like 1 [Source:HGNC Symbol;Acc:20261]

Gene Synonyms

KIAA0410, PRO2463

Location

Chromosome 13: 25,875,763-25,887,080 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 6124 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSG00000139496.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000463407.1	NUPL1-005	6360	485aa	ENSP00000418555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BVL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381736.3	NUPL1-001	4322	599aa	ENSP00000371155.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9314	Q9BVL2	NM_014089.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381718.3	NUPL1-007	2489	587aa	ENSP00000371137.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31949	Q9BVL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381747.3	NUPL1-009	1659	510aa	ENSP00000371166.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BYF2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000394327.2	NUPL1-004	1408	463aa	ENSP00000408147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JRG1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000481980.1	NUPL1-010	605	62aa	ENSP00000418341.1	Nonsense mediated decay		F8WCJ8	-	-
ENST00000490231.1	NUPL1-011	563	36aa	ENSP00000418244.1	Nonsense mediated decay		F8WBZ1	-	-
ENST00000465068.1	NUPL1-014	551	128aa	ENSP00000418904.1	Nonsense mediated decay		F8WC35	-	-
ENST00000466694.1	NUPL1-002	1854	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495460.1	NUPL1-006	947	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477876.1	NUPL1-003	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480187.1	NUPL1-012	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460326.1	NUPL1-013	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476553.1	NUPL1-015	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 551 bps, Translation length: 128 residues

Version

ENST00000465068.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000354757 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000465068.1 NUPL1-014

Summary