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Human (GRCh37.p13)
Description

protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:HGNC Symbol;Acc:9246]

Location
About this transcript

This transcript has 31 exons, is annotated with 35 domains and features, is associated with 133237 variant alleles and maps to 1131 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000550584.2PPFIA2-00254051247aaENSP00000449558.2
 
Protein coding
CCDS59236F8VU88 F8W1Y8 G3V200
Q4LE62
NM_001220473
NP_001207402
GENCODE basic
ENST00000549396.1PPFIA2-00153631257aaENSP00000450337.1
 
Protein coding
CCDS55857F8VU88 F8W1Y8 H0YHK3
O75334
NM_001220476
NM_001282536
NM_003625
NP_001207405
NP_001269465
NP_003616
GENCODE basic
ENST00000549325.1PPFIA2-00347271232aaENSP00000450298.1
 
Protein coding
CCDS55854F8VWR9 F8W1Y8 O75334
NM_001220474
NP_001207403
GENCODE basic
ENST00000548586.1PPFIA2-00440331251aaENSP00000449338.1
 
Protein coding
CCDS55856F8VU88 F8W1Y8 O75334
-GENCODE basic
ENST00000552948.1PPFIA2-00539761236aaENSP00000447868.1
 
Protein coding
CCDS55855F8VU88 F8W1Y8 O75334
NM_001220475
NP_001207404
GENCODE basic
ENST00000407050.4PPFIA2-00639031156aaENSP00000385093.4
 
Protein coding
CCDS55853F8W1Y8 O75334 NM_001220477
NP_001207406
GENCODE basic
ENST00000550359.2PPFIA2-00938081104aaENSP00000447273.2
 
Protein coding
F8W1Y8 H0YHK3 -GENCODE basic
ENST00000443686.3PPFIA2-00837821152aaENSP00000388373.3
 
Protein coding
CCDS55852F8W1Y8 O75334 NM_001220478
NP_001207407
GENCODE basic
ENST00000333447.7PPFIA2-20137081235aaENSP00000327416.7
 
Protein coding
F8VWR9 F8W1Y8 J3KNM3
-GENCODE basic
ENST00000541570.2PPFIA2-0102976783aaENSP00000438337.2
 
Protein coding
CCDS55851F8W1Y8 O75334 NM_001220479
NP_001207408
GENCODE basic
ENST00000541017.1PPFIA2-2022834443aaENSP00000445532.1
 
Protein coding
CCDS55850O75334 NM_001220480
NP_001207409
GENCODE basic
ENST00000553058.1PPFIA2-018917265aaENSP00000448941.1
 
Protein coding
F8VYK7 F8W1Y8 -CDS 3' incomplete
ENST00000548790.1PPFIA2-017852284aaENSP00000446555.1
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000551442.1PPFIA2-012825147aaENSP00000449469.1
 
Protein coding
F8VWR9 -CDS 3' incomplete
ENST00000548670.1PPFIA2-019617124aaENSP00000447792.1
 
Protein coding
F8W1Y8 -CDS 3' incomplete
ENST00000547623.1PPFIA2-014574121aaENSP00000447918.1
 
Protein coding
F8VU88 -CDS 3' incomplete
ENST00000551147.1PPFIA2-022564188aaENSP00000449524.1
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000550018.1PPFIA2-023563188aaENSP00000447189.1
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000551461.1PPFIA2-011283481aaENSP00000449821.1
 
Nonsense mediated decay
F8VWG6 --
ENST00000545296.2PPFIA2-0071539No protein-
 
Processed transcript
---
ENST00000549917.1PPFIA2-020578No protein-
 
Processed transcript
---
ENST00000548453.1PPFIA2-015552No protein-
 
Processed transcript
---
ENST00000552006.1PPFIA2-026493No protein-
 
Processed transcript
---
ENST00000547273.1PPFIA2-025371No protein-
 
Processed transcript
---
ENST00000550798.1PPFIA2-013582No protein-
 
Retained intron
---
ENST00000552020.1PPFIA2-016491No protein-
 
Retained intron
---
ENST00000547180.1PPFIA2-024485No protein-
 
Retained intron
---
ENST00000549344.1PPFIA2-021383No protein-
 
Retained intron
---
Statistics

Exons: 31, Coding exons: 30, Transcript length: 5,405 bps, Translation length: 1,247 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS59236

Version

ENST00000550584.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000408031 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays