Human (GRCh37.p13)
Description

protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:HGNC Symbol;Acc:9246]

Location
About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 80324 variant alleles and maps to 103 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000550584.2PPFIA2-00254051247aaENSP00000449558.2
 
Protein coding
CCDS59236F8VU88 F8W1Y8 G3V200
Q4LE62
NM_001220473.1GENCODE basic
ENST00000549396.1PPFIA2-00153631257aaENSP00000450337.1
 
Protein coding
CCDS55857F8VU88 F8W1Y8 H0YHK3
O75334
NM_003625.3GENCODE basic
ENST00000549325.1PPFIA2-00347271232aaENSP00000450298.1
 
Protein coding
CCDS55854F8VWR9 F8W1Y8 O75334
NM_001220474.1GENCODE basic
ENST00000548586.1PPFIA2-00440331251aaENSP00000449338.1
 
Protein coding
CCDS55856F8VU88 F8W1Y8 O75334
-GENCODE basic
ENST00000552948.1PPFIA2-00539761236aaENSP00000447868.1
 
Protein coding
CCDS55855F8VU88 F8W1Y8 O75334
NM_001220475.1GENCODE basic
ENST00000407050.4PPFIA2-00639031156aaENSP00000385093.4
 
Protein coding
CCDS55853F8W1Y8 O75334 NM_001220477.1GENCODE basic
ENST00000550359.2PPFIA2-00938081104aaENSP00000447273.2
 
Protein coding
F8W1Y8 H0YHK3 -GENCODE basic
ENST00000443686.3PPFIA2-00837821152aaENSP00000388373.3
 
Protein coding
CCDS55852F8W1Y8 O75334 NM_001220478.1GENCODE basic
ENST00000333447.7PPFIA2-20137081235aaENSP00000327416.7
 
Protein coding
F8VWR9 F8W1Y8 J3KNM3
-GENCODE basic
ENST00000541570.2PPFIA2-0102976783aaENSP00000438337.2
 
Protein coding
CCDS55851F8W1Y8 O75334 NM_001220479.1GENCODE basic
ENST00000541017.1PPFIA2-2022834443aaENSP00000445532.1
 
Protein coding
CCDS55850O75334 NM_001220480.1GENCODE basic
ENST00000553058.1PPFIA2-018917265aaENSP00000448941.1
 
Protein coding
F8VYK7 F8W1Y8 -CDS 3' incomplete
ENST00000548790.1PPFIA2-017852284aaENSP00000446555.1
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000551442.1PPFIA2-012825147aaENSP00000449469.1
 
Protein coding
F8VWR9 -CDS 3' incomplete
ENST00000548670.1PPFIA2-019617124aaENSP00000447792.1
 
Protein coding
F8W1Y8 -CDS 3' incomplete
ENST00000547623.1PPFIA2-014574121aaENSP00000447918.1
 
Protein coding
F8VU88 -CDS 3' incomplete
ENST00000551147.1PPFIA2-022564188aaENSP00000449524.1
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000550018.1PPFIA2-023563188aaENSP00000447189.1
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000551461.1PPFIA2-011283481aaENSP00000449821.1
 
Nonsense mediated decay
F8VWG6 --
ENST00000545296.2PPFIA2-0071539No protein-
 
Processed transcript
---
ENST00000549917.1PPFIA2-020578No protein-
 
Processed transcript
---
ENST00000548453.1PPFIA2-015552No protein-
 
Processed transcript
---
ENST00000552006.1PPFIA2-026493No protein-
 
Processed transcript
---
ENST00000547273.1PPFIA2-025371No protein-
 
Processed transcript
---
ENST00000550798.1PPFIA2-013582No protein-
 
Retained intron
---
ENST00000552020.1PPFIA2-016491No protein-
 
Retained intron
---
ENST00000547180.1PPFIA2-024485No protein-
 
Retained intron
---
ENST00000549344.1PPFIA2-021383No protein-
 
Retained intron
---
Statistics

Exons: 5, Coding exons: 3, Transcript length: 574 bps, Translation length: 121 residues

Incomplete CDS

CDS 3' incomplete

Version

ENST00000547623.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000408052 (version 1)