Description
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:HGNC Symbol;Acc:9246]
Location
Chromosome 12: 81,655,746-81,992,119 reverse strand.
About this transcript
This transcript has 28 exons, is annotated with 31 domains and features, is associated with 89568 variant alleles and maps to 919 oligo probes.
Gene
This transcript is a product of gene ENSG00000139220.12 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000550584.2 | PPFIA2-002 | 5405 | 1247aa | ENSP00000449558.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59236 | F8VU88 F8W1Y8 G3V200 Q4LE62 | NM_001220473 NP_001207402 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000549396.1 | PPFIA2-001 | 5363 | 1257aa | ENSP00000450337.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55857 | F8VU88 F8W1Y8 H0YHK3 O75334 | NM_001220476 NM_001282536 NM_003625 NP_001207405 NP_001269465 NP_003616 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000549325.1 | PPFIA2-003 | 4727 | 1232aa | ENSP00000450298.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55854 | F8VWR9 F8W1Y8 O75334 | NM_001220474 NP_001207403 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000548586.1 | PPFIA2-004 | 4033 | 1251aa | ENSP00000449338.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55856 | F8VU88 F8W1Y8 O75334 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000552948.1 | PPFIA2-005 | 3976 | 1236aa | ENSP00000447868.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55855 | F8VU88 F8W1Y8 O75334 | NM_001220475 NP_001207404 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000407050.4 | PPFIA2-006 | 3903 | 1156aa | ENSP00000385093.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55853 | F8W1Y8 O75334 | NM_001220477 NP_001207406 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000550359.2 | PPFIA2-009 | 3808 | 1104aa | ENSP00000447273.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W1Y8 H0YHK3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000443686.3 | PPFIA2-008 | 3782 | 1152aa | ENSP00000388373.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55852 | F8W1Y8 O75334 | NM_001220478 NP_001207407 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000333447.7 | PPFIA2-201 | 3708 | 1235aa | ENSP00000327416.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VWR9 F8W1Y8 J3KNM3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000541570.2 | PPFIA2-010 | 2976 | 783aa | ENSP00000438337.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55851 | F8W1Y8 O75334 | NM_001220479 NP_001207408 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541017.1 | PPFIA2-202 | 2834 | 443aa | ENSP00000445532.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55850 | O75334 | NM_001220480 NP_001207409 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000553058.1 | PPFIA2-018 | 917 | 265aa | ENSP00000448941.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VYK7 F8W1Y8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548790.1 | PPFIA2-017 | 852 | 284aa | ENSP00000446555.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000551442.1 | PPFIA2-012 | 825 | 147aa | ENSP00000449469.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VWR9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548670.1 | PPFIA2-019 | 617 | 124aa | ENSP00000447792.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W1Y8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547623.1 | PPFIA2-014 | 574 | 121aa | ENSP00000447918.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VU88 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551147.1 | PPFIA2-022 | 564 | 188aa | ENSP00000449524.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000550018.1 | PPFIA2-023 | 563 | 188aa | ENSP00000447189.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000551461.1 | PPFIA2-011 | 2834 | 81aa | ENSP00000449821.1 | Nonsense mediated decay | F8VWG6 | - | - | |
| ENST00000545296.2 | PPFIA2-007 | 1539 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000549917.1 | PPFIA2-020 | 578 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000548453.1 | PPFIA2-015 | 552 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000552006.1 | PPFIA2-026 | 493 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000547273.1 | PPFIA2-025 | 371 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000550798.1 | PPFIA2-013 | 582 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000552020.1 | PPFIA2-016 | 491 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547180.1 | PPFIA2-024 | 485 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000549344.1 | PPFIA2-021 | 383 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |