Transcript: ENST00000544432.1 VAMP1-009

Description

vesicle-associated membrane protein 1 (synaptobrevin 1) [Source:HGNC Symbol;Acc:12642]

Gene Synonyms

SYB1, VAMP-1

Location

Chromosome 12: 6,571,546-6,579,780 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 4137 variant alleles and maps to 344 oligo probes.

Gene

This transcript is a product of gene ENSG00000139190.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361716.3	VAMP1-001	3449	117aa	ENSP00000355122.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31731	P23763	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396308.3	VAMP1-002	1113	118aa	ENSP00000379602.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41740	P23763	NM_199245.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400911.3	VAMP1-003	1068	116aa	ENSP00000383702.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44809	P23763	NM_016830.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535180.1	VAMP1-011	747	116aa	ENSP00000444181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544432.1	VAMP1-009	759	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000539047.1	VAMP1-007	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535927.1	VAMP1-008	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000538970.1	VAMP1-010	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 759 bps,

Version

ENST00000544432.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000399268 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000544432.1 VAMP1-009

Summary