Transcript: ENST00000396373.4 ETV6-001

Description

ets variant 6 [Source:HGNC Symbol;Acc:3495]

Gene Synonyms

TEL, TEL/ABL, TEL1

Location

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features, is associated with 115534 variant alleles and maps to 633 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396373.4	ETV6-001	5989	452aa	ENSP00000379658.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8643	P41212 Q9UME7	NM_001987.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545027.1	ETV6-004	652	88aa	ENSP00000441463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YG25	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000266427.3	ETV6-005	160	50aa	ENSP00000266427.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000544715.1	ETV6-002	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000541426.1	ETV6-003	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 5,989 bps, Translation length: 452 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41212

CCDS

This transcript is a member of the Human CCDS set: CCDS8643

Version

ENST00000396373.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000400130 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.