Transcript: ENST00000394854.3 PPP3CA-001

Description

protein phosphatase 3, catalytic subunit, alpha isozyme [Source:HGNC Symbol;Acc:9314]

Gene Synonyms

CALN, CALNA, CALNA1, CCN1, CNA, CNA1, PPP2B

Location

Chromosome 4: 101,944,587-102,268,637 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 15 domains and features, is associated with 136018 variant alleles and maps to 779 oligo probes.

Gene

This transcript is a product of gene ENSG00000138814.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394854.3	PPP3CA-001	4685	521aa	ENSP00000378323.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34037	E7ETC2 E9PK68 E9PPC8 Q08209 Q9UMB2 Q9UMM5	NM_000944.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000323055.6	PPP3CA-005	4519	469aa	ENSP00000320580.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47113	E9PK68 E9PPC8 Q08209 Q9UMB2	NM_001130692.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512215.1	PPP3CA-004	4007	289aa	ENSP00000422781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q08209	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394853.4	PPP3CA-002	3604	511aa	ENSP00000378322.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47114	E9PK68 E9PPC8 Q08209 Q9UMB2	NM_001130691.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507176.1	PPP3CA-007	1958	423aa	ENSP00000422990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETC2 Q9UMM5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523694.2	PPP3CA-201	1365	454aa	ENSP00000429350.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A1A441 E7ETC2 Q9UMB2 Q9UMM5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529324.1	PPP3CA-009	579	147aa	ENSP00000431619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK68 E9PPC8 Q9UMB2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525819.1	PPP3CA-010	569	132aa	ENSP00000434599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPC8 Q9UMB2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000492351.2	PPP3CA-003	836	16aa	ENSP00000426565.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510292.1	PPP3CA-008	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,685 bps, Translation length: 521 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08209

CCDS

This transcript is a member of the Human CCDS set: CCDS34037

Version

ENST00000394854.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000258379 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000394854.3 PPP3CA-001

Summary