Transcript: ENST00000441296.2 USO1-002

Description

USO1 vesicle transport factor [Source:HGNC Symbol;Acc:30904]

Gene Synonyms

P115, TAP, VDP, p115

Location

Chromosome 4: 76,711,301-76,735,382 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 16 domains and features, is associated with 10244 variant alleles and maps to 475 oligo probes.

Gene

This transcript is a product of gene ENSG00000138768.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000264904.6	USO1-001	3589	890aa	ENSP00000264904.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O60763	NM_003715.2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000538159.1	USO1-202	2916	971aa	ENSP00000440586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5GYR8 S4R3X6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441296.2	USO1-002	2850	638aa	ENSP00000411698.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514213.2	USO1-201	2844	947aa	ENSP00000444850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5H4X1 S4R3X6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000603759.1	USO1-003	293	22aa	ENSP00000474837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	S4R3X6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512893.1	USO1-005	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000508454.1	USO1-006	365	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,850 bps, Translation length: 638 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000441296.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366946 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000441296.2 USO1-002

Summary