Transcript: ENST00000440626.1 SLC40A1-005

Description

solute carrier family 40 (iron-regulated transporter), member 1 [Source:HGNC Symbol;Acc:10909]

Gene Synonyms

FPN1, HFE4, IREG1, MST079, MTP1, SLC11A3

Location

Chromosome 2: 190,444,574-190,448,128 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1732 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSG00000138449.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261024.2	SLC40A1-001	3442	571aa	ENSP00000261024.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2299	E7EQF8 E7ES28 Q4PNE6 Q9NP59	NM_014585.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427241.1	SLC40A1-002	824	200aa	ENSP00000390005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQF8 E7ES28 Q4PNE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455320.1	SLC40A1-004	592	55aa	ENSP00000413549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQF8 Q4PNE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427419.1	SLC40A1-003	299	25aa	ENSP00000392730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4PNE2 Q4PNE3 Q4PNE4 Q4PNE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440626.1	SLC40A1-005	209	25aa	ENSP00000396134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4PNE2 Q4PNE3 Q4PNE4 Q4PNE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418714.1	SLC40A1-008	712	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479598.1	SLC40A1-006	993	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 209 bps, Translation length: 25 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000440626.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335041 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000440626.1 SLC40A1-005

Summary