Transcript: ENST00000465841.1 BARD1-006

Description

BRCA1 associated RING domain 1 [Source:HGNC Symbol;Acc:952]

Location

Chromosome 2: 215,610,436-215,617,202 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2275 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSG00000138376.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260947.4	BARD1-001	5499	777aa	ENSP00000260947.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2397	Q99728	NM_001282548.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449967.2	BARD1-201	2257	567aa	ENSP00000406752.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUI3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432456.1	BARD1-002	921	148aa	ENSP00000405020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6M1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421162.1	BARD1-005	766	216aa	ENSP00000392245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IYG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455743.1	BARD1-003	2261	76aa	ENSP00000412186.1	Nonsense mediated decay		F8WCG2	-	-
ENST00000471787.1	BARD1-007	872	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471590.1	BARD1-004	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479904.1	BARD1-008	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465841.1	BARD1-006	175	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 175 bps,

Version

ENST00000465841.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000337104 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000465841.1 BARD1-006

Summary