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Human (GRCh37.p13)
Description

intraflagellar transport 172 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:30391]

Gene Synonyms

KIAA1179, NPHP17, SLB, osm-1, wim

Location
About this transcript

This transcript has 16 exons, is annotated with 13 domains and features, is associated with 5006 variant alleles and maps to 344 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
IFT172-001ENST00000260570.354151749aaENSP00000260570.3
 
Protein coding
CCDS1755H7C161 Q9UG01 NM_015662
NP_056477
GENCODE basic
IFT172-004ENST00000359466.62207532aaENSP00000352443.6
 
Protein coding
-A5PKZ0 F5GZ56 -GENCODE basic
IFT172-005ENST00000416524.21982511aaENSP00000407408.2
 
Protein coding
-F5GZ56 -GENCODE basic
IFT172-012ENST00000443889.1690196aaENSP00000404082.1
 
Protein coding
---CDS 5' incomplete
IFT172-019ENST00000509128.11723324aaENSP00000427255.1
 
Nonsense mediated decay
---CDS 5' incomplete
IFT172-010ENST00000450564.176096aaENSP00000399017.1
 
Nonsense mediated decay
-H7C186 -CDS 5' incomplete
IFT172-016ENST00000420854.1569162aaENSP00000398633.1
 
Nonsense mediated decay
-H7C161 -CDS 5' incomplete
IFT172-017ENST00000507184.15565No protein-
 
Retained intron
----
IFT172-002ENST00000476264.21867No protein-
 
Retained intron
----
IFT172-018ENST00000511842.11832No protein-
 
Retained intron
----
IFT172-006ENST00000475476.2781No protein-
 
Retained intron
----
IFT172-008ENST00000489492.1653No protein-
 
Retained intron
----
IFT172-014ENST00000494163.1607No protein-
 
Retained intron
----
IFT172-009ENST00000476693.1517No protein-
 
Retained intron
----
IFT172-013ENST00000480892.1477No protein-
 
Retained intron
----
IFT172-015ENST00000479419.1420No protein-
 
Retained intron
----
IFT172-011ENST00000475909.1402No protein-
 
Retained intron
----
IFT172-007ENST00000463613.1360No protein-
 
Retained intron
----
Statistics

Exons: 16, Coding exons: 14, Transcript length: 1,982 bps, Translation length: 511 residues

Version

ENST00000416524.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000324511 (version 3)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays