Transcript: ENST00000606153.1 POU2F3-007

Description

POU class 2 homeobox 3 [Source:HGNC Symbol;Acc:19864]

Gene Synonyms

Epoc-1, OCT-11, OCT11, OTF-11, OTF11, PLA-1, PLA1, Skn-1a

Location

Chromosome 11: 120,171,612-120,175,039 forward strand.

About this transcript

This transcript has 1 exon, is associated with 1336 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSG00000137709.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260264.4	POU2F3-006	2903	438aa	ENSP00000260264.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58190	Q9UKI9	NM_001244682.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543440.2	POU2F3-001	1952	436aa	ENSP00000441687.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8431	Q9UKI9	NM_014352.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532663.1	POU2F3-005	482	160aa	ENSP00000453150.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLC5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000533620.1	POU2F3-002	1488	126aa	ENSP00000435738.2	Nonsense mediated decay		E9PIN6	-	-
ENST00000606153.1	POU2F3-007	3428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532638.1	POU2F3-003	1779	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529039.1	POU2F3-004	1034	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 3,428 bps,

Version

ENST00000606153.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000470346 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000606153.1 POU2F3-007

Summary