Transcript: ENST00000260264.4 POU2F3-006

Description

POU class 2 homeobox 3 [Source:HGNC Symbol;Acc:19864]

Gene Synonyms

Epoc-1, OCT-11, OCT11, OTF-11, OTF11, PLA-1, PLA1, Skn-1a

Location

Chromosome 11: 120,107,349-120,190,653 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 29 domains and features, is associated with 35042 variant alleles and maps to 623 oligo probes.

Gene

This transcript is a product of gene ENSG00000137709.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260264.4	POU2F3-006	2903	438aa	ENSP00000260264.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58190	Q9UKI9	NM_001244682.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543440.2	POU2F3-001	1952	436aa	ENSP00000441687.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8431	Q9UKI9	NM_014352.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532663.1	POU2F3-005	482	160aa	ENSP00000453150.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLC5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000533620.1	POU2F3-002	1488	126aa	ENSP00000435738.2	Nonsense mediated decay		E9PIN6	-	-
ENST00000606153.1	POU2F3-007	3428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532638.1	POU2F3-003	1779	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529039.1	POU2F3-004	1034	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,903 bps, Translation length: 438 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UKI9

CCDS

This transcript is a member of the Human CCDS set: CCDS58190

Version

ENST00000260264.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000470345 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000260264.4 POU2F3-006

Summary