Transcript: ENST00000490918.1 BPHL-006

Description

biphenyl hydrolase-like (serine hydrolase) [Source:HGNC Symbol;Acc:1094]

Gene Synonyms

BPH-RP, Bph-rp, MCNAA, VACVASE

Location

Chromosome 6: 3,118,960-3,153,296 forward strand.

About this transcript

This transcript has 7 exons, is associated with 16416 variant alleles and maps to 603 oligo probes.

Gene

This transcript is a product of gene ENSG00000137274.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380368.2	BPHL-201	2156	194aa	ENSP00000369726.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q49AI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380375.3	BPHL-202	2088	274aa	ENSP00000369734.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86WA6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380379.5	BPHL-001	1928	291aa	ENSP00000369739.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4483	Q86WA6	NM_004332.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434640.1	BPHL-007	1186	274aa	ENSP00000390472.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86WA6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423798.1	BPHL-010	576	29aa	ENSP00000395744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000430655.2	BPHL-004	2157	44aa	ENSP00000396637.2	Nonsense mediated decay		F2Z2Q1	-	-
ENST00000424847.2	BPHL-002	1563	44aa	ENSP00000394072.2	Nonsense mediated decay		F2Z2Q1	-	-
ENST00000433912.1	BPHL-005	1063	211aa	ENSP00000413762.1	Nonsense mediated decay		B4DML3	-	-
ENST00000464040.1	BPHL-003	691	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490918.1	BPHL-006	3723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488487.2	BPHL-009	1137	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479273.1	BPHL-008	607	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 3,723 bps,

Version

ENST00000490918.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346931 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000490918.1 BPHL-006

Summary