Transcript: ENST00000314888.9 TLN1-001

Description

talin 1 [Source:HGNC Symbol;Acc:11845]

Gene Synonyms

ILWEQ, KIAA1027, TLN

Location

Chromosome 9: 35,696,945-35,732,392 reverse strand.

About this transcript

This transcript has 57 exons, is annotated with 64 domains and features, is associated with 16572 variant alleles and maps to 1515 oligo probes.

Gene

This transcript is a product of gene ENSG00000137076.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314888.9	TLN1-001	8823	2541aa	ENSP00000316029.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35009	Q9Y490	NM_006289.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540444.1	TLN1-201	8098	2429aa	ENSP00000442981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TCU6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464379.1	TLN1-005	814	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489255.2	TLN1-003	798	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495712.1	TLN1-004	370	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000378192.2	TLN1-002	1693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486788.2	TLN1-006	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465002.1	TLN1-007	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466916.1	TLN1-008	446	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 57, Coding exons: 56, Transcript length: 8,823 bps, Translation length: 2,541 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y490

CCDS

This transcript is a member of the Human CCDS set: CCDS35009

Version

ENST00000314888.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052353 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000314888.9 TLN1-001

Summary