Transcript: ENST00000377798.4 POLR1E-001

Description

polymerase (RNA) I polypeptide E, 53kDa [Source:HGNC Symbol;Acc:17631]

Gene Synonyms

FLJ13390, FLJ13970, PAF53, PRAF1, RP11-405L18.3

Location

About this transcript

This transcript has 12 exons, is annotated with 2 domains and features, is associated with 7564 variant alleles and maps to 492 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377792.3	POLR1E-002	2229	481aa	ENSP00000367023.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9GZS1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377798.4	POLR1E-001	1868	419aa	ENSP00000367029.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6611	Q9GZS1	NM_022490.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442009.2	POLR1E-201	1805	349aa	ENSP00000399887.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65050	E7EX70	NM_001282766.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,868 bps, Translation length: 419 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9GZS1

CCDS

This transcript is a member of the Human CCDS set: CCDS6611

Version

ENST00000377798.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052464 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.