Transcript: ENST00000258494.9 ALDH1L2-001

Description

aldehyde dehydrogenase 1 family, member L2 [Source:HGNC Symbol;Acc:26777]

Gene Synonyms

FLJ38508, mtFDH

Location

About this transcript

This transcript has 23 exons, is annotated with 21 domains and features, is associated with 27671 variant alleles and maps to 906 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258494.9	ALDH1L2-001	7547	923aa	ENSP00000258494.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31891	Q3SY69	NM_001034173.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424857.2	ALDH1L2-201	1678	516aa	ENSP00000389608.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3SY69	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548418.1	ALDH1L2-005	527	92aa	ENSP00000447464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000552270.1	ALDH1L2-002	2746	203aa	ENSP00000447538.1	Nonsense mediated decay		Q3SY69	-	-
ENST00000549335.1	ALDH1L2-003	7397	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552427.1	ALDH1L2-004	486	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 7,547 bps, Translation length: 923 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3SY69

CCDS

This transcript is a member of the Human CCDS set: CCDS31891

Version

ENST00000258494.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000406098 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.