Transcript: ENST00000366641.3 EGLN1-001

Description

egl-9 family hypoxia-inducible factor 1 [Source:HGNC Symbol;Acc:1232]

Gene Synonyms

C1orf12, ECYT3, HIF-PH2, HIFPH2, HPH-2, HPH2, PHD2, SM-20, SM20, ZMYND6

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 28249 variant alleles and maps to 748 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366641.3	EGLN1-001	7097	426aa	ENSP00000355601.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1595	Q9GZT9 Q9NTU9 R4SCQ0	NM_022051.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000476717.1	EGLN1-002	829	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 7,097 bps, Translation length: 426 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9GZT9

CCDS

This transcript is a member of the Human CCDS set: CCDS1595

Version

ENST00000366641.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000092879 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.