Transcript: ENST00000343505.5 NHSL1-002

Description

NHS-like 1 [Source:HGNC Symbol;Acc:21021]

Gene Synonyms

C6orf63, KIAA1357, bA43P8.1

Location

Chromosome 6: 138,743,708-138,820,631 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 19 domains and features, is associated with 32593 variant alleles and maps to 517 oligo probes.

Gene

This transcript is a product of gene ENSG00000135540.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000427025.2	NHSL1-001	7500	1610aa	ENSP00000394546.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55063	B4DS58 Q5SYE7	NM_020464.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343505.5	NHSL1-002	6535	1606aa	ENSP00000344672.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47487	B4DS58 Q5SYE7	NM_001144060.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342260.5	NHSL1-009	736	221aa	ENSP00000344582.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PAK2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533765.1	NHSL1-008	568	137aa	ENSP00000434958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMJ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491526.2	NHSL1-003	506	169aa	ENSP00000433523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000479393.2	NHSL1-004	471	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000426841.2	NHSL1-006	947	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534376.1	NHSL1-007	609	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468095.2	NHSL1-005	459	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 6,535 bps, Translation length: 1,606 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SYE7

CCDS

This transcript is a member of the Human CCDS set: CCDS47487

Version

ENST00000343505.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000043701 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000343505.5 NHSL1-002

Summary