Transcript: ENST00000549154.1 ESPL1-003

Description

extra spindle pole bodies homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:16856]

Gene Synonyms

ESP1, KIAA0165, SEPA

Location

Chromosome 12: 53,681,040-53,687,419 forward strand.

About this transcript

This transcript has 10 exons, is associated with 3030 variant alleles and maps to 469 oligo probes.

Gene

This transcript is a product of gene ENSG00000135476.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000257934.4	ESPL1-201	6623	2120aa	ENSP00000257934.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8852	H3BRX7 Q14674	NM_012291.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552462.1	ESPL1-002	6447	2120aa	ENSP00000449831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8852	H3BRX7 Q14674	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553219.1	ESPL1-007	714	207aa	ENSP00000456450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552671.1	ESPL1-001	6662	49aa	ENSP00000447054.1	Nonsense mediated decay		H3BM31	-	-
ENST00000550026.1	ESPL1-004	522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000549154.1	ESPL1-003	4078	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553016.1	ESPL1-005	1320	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535123.2	ESPL1-008	1203	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552600.1	ESPL1-006	894	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 4,078 bps,

Version

ENST00000549154.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000406903 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000549154.1 ESPL1-003

Summary