Transcript: ENST00000349155.2 TBX3-001

Description

T-box 3 [Source:HGNC Symbol;Acc:11602]

Gene Synonyms

TBX3-ISO, UMS, XHL

Location

About this transcript

This transcript has 7 exons, is annotated with 26 domains and features, is associated with 8475 variant alleles and maps to 663 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000349155.2	TBX3-001	4723	723aa	ENSP00000257567.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9175	O15119	NM_005996.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000257566.3	TBX3-002	4208	743aa	ENSP00000257566.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9176	O15119	NM_016569.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552054.1	TBX3-003	1814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548503.1	TBX3-005	494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,723 bps, Translation length: 723 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15119

CCDS

This transcript is a member of the Human CCDS set: CCDS9175

Version

ENST00000349155.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000404945 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.