Description
SRY (sex determining region Y)-box 5 [Source:HGNC Symbol;Acc:11201]
Gene Synonyms
L-SOX5, L-SOX5B, L-SOX5F, MGC35153, RP11-444D3.1
Location
Chromosome 12: 23,689,464-24,103,854 reverse strand.
About this transcript
This transcript has 13 exons, is annotated with 10 domains and features, is associated with 186586 variant alleles and maps to 320 oligo probes.
Gene
This transcript is a product of gene ENSG00000134532.11 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000546136.1 | SOX5-003 | 6969 | 750aa | ENSP00000437487.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44844 | F5GWL1 P35711 T2CYZ2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000309359.1 | SOX5-201 | 4315 | 750aa | ENSP00000308927.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44844 | F5GWL1 P35711 T2CYZ2 | NM_152989.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000451604.2 | SOX5-002 | 4261 | 763aa | ENSP00000398273.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8699 | F5GWL1 P35711 T2CYZ2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000381381.2 | SOX5-202 | 3991 | 642aa | ENSP00000370788.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58216 | F5GWL1 P35711 | NM_001261414.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000537393.1 | SOX5-008 | 2769 | 728aa | ENSP00000439832.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0I3 T2CZM2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000545921.1 | SOX5-007 | 2589 | 753aa | ENSP00000443520.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58217 | F5GWL1 P35711 T2CYZ2 | NM_001261415.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541536.1 | SOX5-009 | 2365 | 642aa | ENSP00000441973.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58216 | F5GWL1 P35711 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000396007.2 | SOX5-001 | 1379 | 377aa | ENSP00000379328.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41761 | P35711 | NM_178010.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541847.1 | SOX5-016 | 758 | 241aa | ENSP00000442119.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GWL1 F5H876 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000441133.2 | SOX5-004 | 638 | 128aa | ENSP00000393240.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V0H1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000538083.1 | SOX5-010 | 617 | 144aa | ENSP00000441579.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GWL1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000367206.3 | SOX5-006 | 1816 | 509aa | ENSP00000356174.3 | Nonsense mediated decay | F5GWL1 I3L0A5 | - | - | |
| ENST00000536850.1 | SOX5-011 | 606 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000535530.1 | SOX5-014 | 576 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000536629.1 | SOX5-015 | 570 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000542241.1 | SOX5-012 | 376 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000536911.1 | SOX5-013 | 855 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |