Transcript: ENST00000477118.2 NAV1-008

Description

neuron navigator 1 [Source:HGNC Symbol;Acc:15989]

Gene Synonyms

DKFZp781D0314, FLJ12560, FLJ14203, KIAA1151, KIAA1213, MGC14961, POMFIL3, STEERIN1, UNC53H1, steerin-1

Location

Chromosome 1: 201,755,678-201,772,834 forward strand.

About this transcript

This transcript has 6 exons, is associated with 7120 variant alleles and maps to 380 oligo probes.

Gene

This transcript is a product of gene ENSG00000134369.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367296.4	NAV1-001	13091	1877aa	ENSP00000356265.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1414	Q8NEY1	NM_020443.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295624.6	NAV1-201	13014	1874aa	ENSP00000295624.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NEY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367297.4	NAV1-202	12999	1869aa	ENSP00000356266.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NEY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367300.3	NAV1-203	12843	1817aa	ENSP00000356269.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NEY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367295.1	NAV1-002	11645	1483aa	ENSP00000356264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53456	Q8NEY1	NM_001167738.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367302.1	NAV1-006	9139	1830aa	ENSP00000356271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430015.1	NAV1-004	2263	755aa	ENSP00000405437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000438083.1	NAV1-007	680	227aa	ENSP00000389123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000477118.2	NAV1-008	4371	26aa	ENSP00000426436.1	Nonsense mediated decay		H0YA94	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469130.1	NAV1-005	5407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490213.1	NAV1-003	2968	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491403.1	NAV1-009	461	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 4,371 bps, Translation length: 26 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000477118.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000097758 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000477118.2 NAV1-008

Summary