Transcript: ENST00000367296.4 NAV1-001

Description

neuron navigator 1 [Source:HGNC Symbol;Acc:15989]

Gene Synonyms

DKFZp781D0314, FLJ12560, FLJ14203, KIAA1151, KIAA1213, MGC14961, POMFIL3, STEERIN1, UNC53H1, steerin-1

Location

Chromosome 1: 201,617,377-201,796,097 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 25 domains and features, is associated with 72661 variant alleles and maps to 1188 oligo probes.

Gene

This transcript is a product of gene ENSG00000134369.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367296.4	NAV1-001	13091	1877aa	ENSP00000356265.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1414	Q8NEY1	NM_020443.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295624.6	NAV1-201	13014	1874aa	ENSP00000295624.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NEY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367297.4	NAV1-202	12999	1869aa	ENSP00000356266.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NEY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367300.3	NAV1-203	12843	1817aa	ENSP00000356269.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NEY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367295.1	NAV1-002	11645	1483aa	ENSP00000356264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53456	Q8NEY1	NM_001167738.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367302.1	NAV1-006	9139	1830aa	ENSP00000356271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430015.1	NAV1-004	2263	755aa	ENSP00000405437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000438083.1	NAV1-007	680	227aa	ENSP00000389123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000477118.2	NAV1-008	4371	26aa	ENSP00000426436.1	Nonsense mediated decay		H0YA94	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469130.1	NAV1-005	5407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490213.1	NAV1-003	2968	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491403.1	NAV1-009	461	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 13,091 bps, Translation length: 1,877 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NEY1

CCDS

This transcript is a member of the Human CCDS set: CCDS1414

Version

ENST00000367296.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000087013 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000367296.4 NAV1-001

Summary