Transcript: ENST00000369406.3 HMGCS2-001

Description

3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) [Source:HGNC Symbol;Acc:5008]

Location

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 9372 variant alleles and maps to 522 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369406.3	HMGCS2-001	2428	508aa	ENSP00000358414.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS905	P54868	NM_005518.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544913.2	HMGCS2-004	1925	466aa	ENSP00000439495.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53353	P54868	NM_001166107.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476640.1	HMGCS2-002	857	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472375.1	HMGCS2-003	634	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,428 bps, Translation length: 508 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54868

CCDS

This transcript is a member of the Human CCDS set: CCDS905

Version

ENST00000369406.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000033469 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.