Human (GRCh37.p13)
Description

transient receptor potential cation channel, subfamily M, member 1 [Source:HGNC Symbol;Acc:7146]

Gene Synonyms

CSNB1C, LTRPC1, MLSN, MLSN1

Location
About this transcript

This transcript has 27 exons, is annotated with 19 domains and features, is associated with 69944 variant alleles and maps to 611 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000542188.1TRPM1-20157151642aaENSP00000437849.1
 
Protein coding
CCDS58347H0YKU7 Q7Z4N2 NM_001252020.1GENCODE basic
ENST00000397795.2TRPM1-00156871603aaENSP00000380897.2
 
Protein coding
CCDS10024H0YKU7 Q7Z4N2 NM_002420.5GENCODE basic
ENST00000256552.6TRPM1-00455141625aaENSP00000256552.6
 
Protein coding
CCDS58346H0YKU7 Q7Z4N2 NM_001252024.1GENCODE basic
ENST00000558768.1TRPM1-00745841527aaENSP00000453119.1
 
Protein coding
Q7Z4N2 -CDS 5' incomplete
ENST00000558445.1TRPM1-00842821390aaENSP00000452946.1
 
Protein coding
H0YKU7 -CDS 3' incomplete
ENST00000559177.1TRPM1-0021627505aaENSP00000453477.1
 
Protein coding
H0YM61 -CDS 3' incomplete
ENST00000559179.1TRPM1-0031002136aaENSP00000453851.1
 
Protein coding
CCDS58345Q7Z4N2 NM_001252030.1GENCODE basic
ENST00000560801.1TRPM1-0064457230aaENSP00000453644.1
 
Nonsense mediated decay
Q7Z4N2 -CDS 5' incomplete
ENST00000560658.1TRPM1-0051649300aaENSP00000454077.1
 
Nonsense mediated decay
Q7Z4N2 --
ENST00000558212.1TRPM1-011670No protein-
 
Retained intron
---
ENST00000557948.1TRPM1-010564No protein-
 
Retained intron
---
ENST00000558070.1TRPM1-009426No protein-
 
Retained intron
---
Statistics

Exons: 27, Coding exons: 26, Transcript length: 4,282 bps, Translation length: 1,390 residues

Incomplete CDS

CDS 3' incomplete

Version

ENST00000558445.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs3784589, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HAPMAP-MKK.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000417382 (version 1)