Transcript: ENST00000389708.3 ARNTL-202

Description

aryl hydrocarbon receptor nuclear translocator-like [Source:HGNC Symbol;Acc:701]

Gene Synonyms

BHLHE5, BMAL1, BMAL1c, JAP3, MOP3, PASD3, TIC, bHLHe5

Location

Chromosome 11: 13,299,378-13,408,808 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 32 domains and features, is associated with 46644 variant alleles and maps to 694 oligo probes.

Gene

This transcript is a product of gene ENSG00000133794.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389708.3	ARNTL-202	2836	526aa	ENSP00000374358.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 F8W6J9 H0YER9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401424.1	ARNTL-003	2788	583aa	ENSP00000385915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI92 E9PPV4 E9PRB1 O00327	NM_001030273.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389707.4	ARNTL-001	2776	625aa	ENSP00000374357.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31430	E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 O00327	NM_001178.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403290.1	ARNTL-004	2746	626aa	ENSP00000384517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 O00327	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403510.3	ARNTL-002	2745	582aa	ENSP00000385581.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44543	E9PI92 E9PPV4 E9PRB1 O00327	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396441.3	ARNTL-203	2736	625aa	ENSP00000379718.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31430	E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 O00327	NM_001030272.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403482.3	ARNTL-005	2389	624aa	ENSP00000385897.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O00327	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361003.4	ARNTL-201	2387	508aa	ENSP00000354278.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 O00327	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530357.1	ARNTL-018	868	141aa	ENSP00000436313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI92 E9PPV4 E9PRB1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534544.1	ARNTL-015	807	59aa	ENSP00000431566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKN1 E9PSD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482049.1	ARNTL-008	739	72aa	ENSP00000436721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI92 E9PRB1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529388.1	ARNTL-022	610	135aa	ENSP00000433571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529050.1	ARNTL-016	571	23aa	ENSP00000434044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PSD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533520.1	ARNTL-020	567	100aa	ENSP00000431488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKG7 E9PKN1 E9PL54 E9PSD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529825.1	ARNTL-017	551	46aa	ENSP00000434263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRB1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527998.1	ARNTL-019	519	76aa	ENSP00000433540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKG7 E9PKN1 E9PSD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531665.1	ARNTL-011	391	61aa	ENSP00000434781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNI4 E9PSD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524392.1	ARNTL-014	1421	171aa	ENSP00000436442.1	Nonsense mediated decay		H0YER9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000497429.1	ARNTL-007	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472842.1	ARNTL-006	3862	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480685.1	ARNTL-009	633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529390.1	ARNTL-013	591	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485918.2	ARNTL-021	457	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534102.1	ARNTL-012	418	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 13, Transcript length: 2,836 bps, Translation length: 526 residues

Version

ENST00000389708.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000389708.3 ARNTL-202

Summary