Transcript: ENST00000360375.3 LRRCC1-001

Description

leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:29373]

Gene Synonyms

CLERC, KIAA1764, SAP2, VFL1

Location

About this transcript

This transcript has 19 exons, is annotated with 32 domains and features, is associated with 15981 variant alleles and maps to 669 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000414626.2	LRRCC1-006	4493	1012aa	ENSP00000394695.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C099	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360375.3	LRRCC1-001	3813	1032aa	ENSP00000353538.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43750	Q9C099	NM_033402.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522770.1	LRRCC1-003	2800	35aa	ENSP00000428506.1	Nonsense mediated decay		E5RI08	-	-
ENST00000517875.1	LRRCC1-002	2385	36aa	ENSP00000430960.1	Nonsense mediated decay		E5RGA4 E5RI08	-	-
ENST00000522567.1	LRRCC1-005	2122	36aa	ENSP00000428794.1	Nonsense mediated decay		E5RGA4 E5RI08	-	-
ENST00000523669.1	LRRCC1-004	1004	36aa	ENSP00000430878.1	Nonsense mediated decay		E5RGA4 E5RI08	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,813 bps, Translation length: 1,032 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9C099

CCDS

This transcript is a member of the Human CCDS set: CCDS43750

Version

ENST00000360375.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000380267 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.