Transcript: ENST00000496259.1 KRBA1-003

Description

KRAB-A domain containing 1 [Source:HGNC Symbol;Acc:22228]

Gene Synonyms

KIAA1862

Location

Chromosome 7: 149,417,192-149,431,660 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 15 domains and features, is associated with 7324 variant alleles and maps to 478 oligo probes.

Gene

This transcript is a product of gene ENSG00000133619.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000255992.10	KRBA1-201	4017	1029aa	ENSP00000255992.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4P1W5 C9J5U6	NM_032534.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319551.8	KRBA1-202	3837	969aa	ENSP00000317165.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PL33 C4P1W5 C9J5U6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485033.2	KRBA1-004	3434	969aa	ENSP00000420112.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PL33 C4P1W5 C9J5U6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467333.1	KRBA1-007	699	167aa	ENSP00000418841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486744.1	KRBA1-005	596	35aa	ENSP00000419900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9JYG0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497895.1	KRBA1-006	527	103aa	ENSP00000417921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9J5U6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000496259.1	KRBA1-003	3449	617aa	ENSP00000418647.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000479560.1	KRBA1-001	4019	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000466546.1	KRBA1-002	3762	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000496080.1	KRBA1-008	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000489951.1	KRBA1-009	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 3,449 bps, Translation length: 617 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000496259.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000349840 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000496259.1 KRBA1-003

Summary