Human (GRCh37.p13)
Description

spastic paraplegia 20 (Troyer syndrome) [Source:HGNC Symbol;Acc:18514]

Gene Synonyms

KIAA0610, SPARTIN, TAHCCP1

Location
About this transcript

This transcript has 9 exons, is annotated with 12 domains and features, is associated with 19011 variant alleles and maps to 607 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000451493.1SPG20-2024944666aaENSP00000414147.1
 
Protein coding
CCDS9356Q8N0X7 NM_001142295.1Ensembl CanonicalGENCODE Basic
ENST00000355182.4SPG20-2014820666aaENSP00000347314.4
 
Protein coding
CCDS9356Q8N0X7 NM_001142294.1GENCODE Basic
ENST00000438666.2SPG20-0024789666aaENSP00000406061.2
 
Protein coding
CCDS9356Q8N0X7 NM_015087.4GENCODE Basic
ENST00000494062.2SPG20-0103018666aaENSP00000473599.1
 
Protein coding
CCDS9356Q8N0X7 NM_001142296.1GENCODE Basic
ENST00000495510.1SPG20-0032001No protein-
 
Processed transcript
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ENST00000494703.1SPG20-011796No protein-
 
Processed transcript
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ENST00000475603.1SPG20-008675No protein-
 
Processed transcript
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ENST00000491805.1SPG20-006668No protein-
 
Processed transcript
---
ENST00000482146.1SPG20-007583No protein-
 
Processed transcript
---
ENST00000460126.1SPG20-005392No protein-
 
Processed transcript
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ENST00000476377.1SPG20-009362No protein-
 
Processed transcript
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Statistics

Exons: 9, Coding exons: 8, Transcript length: 4,789 bps, Translation length: 666 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N0X7

CCDS

This transcript is a member of the Human CCDS set: CCDS9356

Version

ENST00000438666.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000044494 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.