Transcript: ENST00000355182.4 SPG20-201

Description

spastic paraplegia 20 (Troyer syndrome) [Source:HGNC Symbol;Acc:18514]

Gene Synonyms

KIAA0610, SPARTIN, TAHCCP1

Location

Chromosome 13: 36,875,777-36,944,317 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 12 domains and features, is associated with 28671 variant alleles and maps to 572 oligo probes.

Gene

This transcript is a product of gene ENSG00000133104.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000451493.1	SPG20-202	4944	666aa	ENSP00000414147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9356	Q8N0X7	NM_001142295.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355182.4	SPG20-201	4820	666aa	ENSP00000347314.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9356	Q8N0X7	NM_001142294.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438666.2	SPG20-002	4789	666aa	ENSP00000406061.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9356	Q8N0X7	NM_015087.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494062.2	SPG20-010	3018	666aa	ENSP00000473599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9356	Q8N0X7	NM_001142296.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495510.1	SPG20-003	2001	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494703.1	SPG20-011	796	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475603.1	SPG20-008	675	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491805.1	SPG20-006	668	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482146.1	SPG20-007	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460126.1	SPG20-005	392	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476377.1	SPG20-009	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 4,820 bps, Translation length: 666 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N0X7

CCDS

This transcript is a member of the Human CCDS set: CCDS9356

Version

ENST00000355182.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000044494 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000355182.4 SPG20-201

Summary