Transcript: ENST00000382909.1 ZMYM5-002

Description

zinc finger, MYM-type 5 [Source:HGNC Symbol;Acc:13029]

Gene Synonyms

HSPC050, MYM, ZNF198L1, ZNF237

Location

Chromosome 13: 20,397,622-20,425,936 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 13219 variant alleles and maps to 443 oligo probes.

Gene

This transcript is a product of gene ENSG00000132950.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337963.4	ZMYM5-201	3268	669aa	ENSP00000337034.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YH25 Q9UJ78	NM_001142684.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502168.2	ZMYM5-006	2604	659aa	ENSP00000445779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YH25	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000382905.4	ZMYM5-003	1382	382aa	ENSP00000372361.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31942	Q9UJ78	NM_001039650.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382907.4	ZMYM5-001	1092	208aa	ENSP00000372364.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31943	Q9UJ78	NM_001039649.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535942.1	ZMYM5-007	3200	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000382909.1	ZMYM5-002	2861	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467542.1	ZMYM5-004	1622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495534.1	ZMYM5-005	1336	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,861 bps,

Version

ENST00000382909.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000044043 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000382909.1 ZMYM5-002

Summary