Transcript: ENST00000505068.1 GRSF1-002

Description

G-rich RNA sequence binding factor 1 [Source:HGNC Symbol;Acc:4610]

Location

Chromosome 4: 71,685,248-71,705,614 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 11074 variant alleles and maps to 591 oligo probes.

Gene

This transcript is a product of gene ENSG00000132463.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254799.6	GRSF1-001	6666	480aa	ENSP00000254799.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47069	Q12849	NM_002092.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439371.1	GRSF1-201	6462	318aa	ENSP00000389219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47070	Q12849	NM_001098477.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000499044.2	GRSF1-004	2491	453aa	ENSP00000427354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YAK1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502323.1	GRSF1-006	1794	318aa	ENSP00000425430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47070	Q12849	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514161.1	GRSF1-005	1765	417aa	ENSP00000421789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5I6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545193.1	GRSF1-202	1738	362aa	ENSP00000443380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5I6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506453.1	GRSF1-017	925	114aa	ENSP00000427644.1	Nonsense mediated decay		H0YAM1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508091.1	GRSF1-016	419	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505068.1	GRSF1-002	3561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 3,561 bps,

Version

ENST00000505068.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362643 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000505068.1 GRSF1-002

Summary