Transcript: ENST00000254799.6 GRSF1-001

Description

G-rich RNA sequence binding factor 1 [Source:HGNC Symbol;Acc:4610]

Location

Chromosome 4: 71,681,499-71,705,662 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 22 domains and features, is associated with 12951 variant alleles and maps to 699 oligo probes.

Gene

This transcript is a product of gene ENSG00000132463.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254799.6	GRSF1-001	6666	480aa	ENSP00000254799.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47069	Q12849	NM_002092.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439371.1	GRSF1-201	6462	318aa	ENSP00000389219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47070	Q12849	NM_001098477.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000499044.2	GRSF1-004	2491	453aa	ENSP00000427354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YAK1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502323.1	GRSF1-006	1794	318aa	ENSP00000425430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47070	Q12849	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514161.1	GRSF1-005	1765	417aa	ENSP00000421789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5I6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545193.1	GRSF1-202	1738	362aa	ENSP00000443380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5I6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506453.1	GRSF1-017	925	114aa	ENSP00000427644.1	Nonsense mediated decay		H0YAM1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508091.1	GRSF1-016	419	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505068.1	GRSF1-002	3561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 6,666 bps, Translation length: 480 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12849

CCDS

This transcript is a member of the Human CCDS set: CCDS47069

Version

ENST00000254799.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000362642 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000254799.6 GRSF1-001

Summary