Transcript: ENST00000478777.1 PNISR-008

Description

PNN-interacting serine/arginine-rich protein [Source:HGNC Symbol;Acc:21222]

Gene Synonyms

C6orf111, DKFZp564B0769, FLJ14752, HSPC306, RP11-98I9.2, SFRS18, SRRP130, SRrp130, bA98I9.2

Location

Chromosome 6: 99,849,337-99,873,184 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 10895 variant alleles and maps to 601 oligo probes.

Gene

This transcript is a product of gene ENSG00000132424.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369239.5	PNISR-007	5112	805aa	ENSP00000358242.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5043	Q8TEZ9 Q8TF01	NM_032870.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438806.1	PNISR-201	3142	805aa	ENSP00000387997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5043	Q8TEZ9 Q8TF01	NM_015491.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478777.1	PNISR-008	2422	413aa	ENSP00000435246.1	Nonsense mediated decay		Q8TF01	-	-
ENST00000466057.1	PNISR-006	2850	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460600.1	PNISR-004	2178	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463021.1	PNISR-009	1939	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498075.1	PNISR-005	1027	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492294.1	PNISR-001	652	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476159.1	PNISR-002	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481229.1	PNISR-003	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 7, Transcript length: 2,422 bps, Translation length: 413 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TF01

Version

ENST00000478777.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041599 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000478777.1 PNISR-008

Summary