Human (GRCh37.p13)
Description

pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:24717]

Gene Synonyms

DKFZp666K071, FLJ20758, MRP-S39, MRPS39

Location
About this transcript

This transcript has 24 exons, is annotated with 10 domains and features, is associated with 16439 variant alleles and maps to 1020 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000254630.7PTCD3-0016734689aaENSP00000254630.7
 
Protein coding
CCDS33235Q96EY7 NM_017952.5GENCODE basic
ENST00000409277.3PTCD3-201866208aaENSP00000386462.3
 
Protein coding
B4DF73 B8ZZQ4 -GENCODE basic
ENST00000409783.2PTCD3-009555177aaENSP00000386922.2
 
Protein coding
B8ZZQ4 -CDS 3' incomplete
ENST00000418628.1PTCD3-00453269aaENSP00000394441.1
 
Nonsense mediated decay
F8WE76 --
ENST00000409326.2PTCD3-00252278aaENSP00000386963.2
 
Nonsense mediated decay
F8WBP9 --
ENST00000465560.1PTCD3-005747No protein-
 
Processed transcript
---
ENST00000488801.1PTCD3-003568No protein-
 
Processed transcript
---
ENST00000477520.1PTCD3-015556No protein-
 
Processed transcript
---
ENST00000494323.1PTCD3-019540No protein-
 
Processed transcript
---
ENST00000487043.1PTCD3-0201054No protein-
 
Retained intron
---
ENST00000484203.1PTCD3-011928No protein-
 
Retained intron
---
ENST00000464541.1PTCD3-013890No protein-
 
Retained intron
---
ENST00000469585.1PTCD3-014885No protein-
 
Retained intron
---
ENST00000493430.1PTCD3-016782No protein-
 
Retained intron
---
ENST00000467273.1PTCD3-018757No protein-
 
Retained intron
---
ENST00000476215.1PTCD3-021754No protein-
 
Retained intron
---
ENST00000480102.1PTCD3-012589No protein-
 
Retained intron
---
ENST00000473829.1PTCD3-006587No protein-
 
Retained intron
---
ENST00000483925.1PTCD3-007576No protein-
 
Retained intron
---
ENST00000472044.1PTCD3-017293No protein-
 
Retained intron
---
Statistics

Exons: 24, Coding exons: 24, Transcript length: 6,734 bps, Translation length: 689 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96EY7

CCDS

This transcript is a member of the Human CCDS set: CCDS33235

Version

ENST00000254630.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000329854 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.