Transcript: ENST00000254624.5 EFR3A-001

Description

EFR3 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:28970]

Gene Synonyms

KIAA0143

Location

Chromosome 8: 132,916,335-133,025,889 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 5 domains and features, is associated with 47122 variant alleles and maps to 801 oligo probes.

Gene

This transcript is a product of gene ENSG00000132294.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254624.5	EFR3A-001	5438	821aa	ENSP00000254624.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34942	B4DZ89 E5RJS1 Q14156	NM_015137.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519656.1	EFR3A-002	5247	785aa	ENSP00000428086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZ89 E5RJS1 Q14156	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334503.4	EFR3A-201	4776	821aa	ENSP00000334769.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZ89 E5RJS1 H9KV44	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522709.1	EFR3A-003	780	133aa	ENSP00000430512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJS1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520362.1	EFR3A-004	477	13aa	ENSP00000428844.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521940.1	EFR3A-006	804	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519920.1	EFR3A-007	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523074.1	EFR3A-005	831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 5,438 bps, Translation length: 821 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14156

CCDS

This transcript is a member of the Human CCDS set: CCDS34942

Version

ENST00000254624.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318886 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000254624.5 EFR3A-001

Summary