Transcript: ENST00000395745.2 DHX30-003

Description

DEAH (Asp-Glu-Ala-His) box helicase 30 [Source:HGNC Symbol;Acc:16716]

Gene Synonyms

DDX30, FLJ11214, KIAA0890, RETCOR

Location

Chromosome 3: 47,844,624-47,891,682 forward strand.

About this transcript

This transcript has 23 exons, is associated with 21579 variant alleles and maps to 639 oligo probes.

Gene

This transcript is a product of gene ENSG00000132153.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000446256.2	DHX30-201	4115	1155aa	ENSP00000392601.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7L2E3	NM_014966.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445061.1	DHX30-001	4065	1194aa	ENSP00000405620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2759	H7BXY3 Q7L2E3	NM_138615.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348968.4	DHX30-005	3994	1166aa	ENSP00000343442.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457607.1	DHX30-007	3748	1222aa	ENSP00000394682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7L2E3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395745.2	DHX30-003	3887	42aa	ENSP00000379094.2	Nonsense mediated decay		F6R0H4	-	-
ENST00000441384.1	DHX30-002	1957	42aa	ENSP00000410571.1	Nonsense mediated decay		F6R0H4	-	-
ENST00000415400.1	DHX30-011	613	42aa	ENSP00000395166.1	Nonsense mediated decay		F6R0H4	-	-
ENST00000476446.1	DHX30-008	752	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492893.1	DHX30-010	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461905.1	DHX30-014	591	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470959.1	DHX30-013	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471082.1	DHX30-012	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472718.1	DHX30-004	1464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474183.1	DHX30-015	963	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 3, Transcript length: 3,887 bps, Translation length: 42 residues

Version

ENST00000395745.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346135 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000395745.2 DHX30-003

Summary