Transcript: ENST00000588932.1 CC2D1A-008

Description

coiled-coil and C2 domain containing 1A [Source:HGNC Symbol;Acc:30237]

Gene Synonyms

AKI1, FLJ20241, FREUD-1, Freud-1/Aki1, MRT3

Location

Chromosome 19: 14,031,090-14,034,566 forward strand.

About this transcript

This transcript has 5 exons, is associated with 1628 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000132024.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318003.7	CC2D1A-001	3581	951aa	ENSP00000313601.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42512	Q6P1N0	NM_017721.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589606.1	CC2D1A-010	3117	950aa	ENSP00000467526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P1N0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587508.1	CC2D1A-005	1667	405aa	ENSP00000466586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586955.1	CC2D1A-006	2743	378aa	ENSP00000465376.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000589138.1	CC2D1A-004	2435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585896.1	CC2D1A-002	1843	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589224.1	CC2D1A-009	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588932.1	CC2D1A-008	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589679.1	CC2D1A-007	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 806 bps,

Version

ENST00000588932.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457961 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000588932.1 CC2D1A-008

Summary