Transcript: ENST00000318003.7 CC2D1A-001

Description

coiled-coil and C2 domain containing 1A [Source:HGNC Symbol;Acc:30237]

Gene Synonyms

AKI1, FLJ20241, FREUD-1, Freud-1/Aki1, MRT3

Location

Chromosome 19: 14,017,014-14,041,692 forward strand.

About this transcript

This transcript has 29 exons, is annotated with 22 domains and features, is associated with 12432 variant alleles and maps to 914 oligo probes.

Gene

This transcript is a product of gene ENSG00000132024.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318003.7	CC2D1A-001	3581	951aa	ENSP00000313601.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42512	Q6P1N0	NM_017721.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589606.1	CC2D1A-010	3117	950aa	ENSP00000467526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P1N0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587508.1	CC2D1A-005	1667	405aa	ENSP00000466586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586955.1	CC2D1A-006	2743	378aa	ENSP00000465376.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000589138.1	CC2D1A-004	2435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585896.1	CC2D1A-002	1843	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589224.1	CC2D1A-009	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588932.1	CC2D1A-008	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589679.1	CC2D1A-007	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 3,581 bps, Translation length: 951 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P1N0

CCDS

This transcript is a member of the Human CCDS set: CCDS42512

Version

ENST00000318003.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000457954 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000318003.7 CC2D1A-001

Summary