Transcript: ENST00000543643.2 GCH1-003

Description

GTP cyclohydrolase 1 [Source:HGNC Symbol;Acc:4193]

Gene Synonyms

DYT14, DYT5, DYT5a, GCH, GTP-CH-1, GTPCH1, HPABH4B

Location

Chromosome 14: 55,308,734-55,369,525 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 27871 variant alleles and maps to 440 oligo probes.

Gene

This transcript is a product of gene ENSG00000131979.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000491895.2	GCH1-002	2943	250aa	ENSP00000419045.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9720	P30793 Q8IZH9 Q96T74	NM_000161.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395514.1	GCH1-201	1977	250aa	ENSP00000378890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9720	P30793 Q8IZH9 Q96T74	NM_001024024.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543643.2	GCH1-003	1897	233aa	ENSP00000444011.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41954	P30793	NM_001024070.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536224.2	GCH1-004	1805	213aa	ENSP00000445246.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45110	P30793	NM_001024071.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000254299.4	GCH1-001	2901	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000395521.6	GCH1-005	351	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,897 bps, Translation length: 233 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P30793

CCDS

This transcript is a member of the Human CCDS set: CCDS41954

Version

ENST00000543643.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000074213 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000543643.2 GCH1-003

Summary