Transcript: ENST00000316843.4 LLGL1-001

Description

lethal giant larvae homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:6628]

Gene Synonyms

DLG4, HUGL, HUGL-1, HUGL1, LLGL

Location

About this transcript

This transcript has 23 exons, is annotated with 35 domains and features, is associated with 10435 variant alleles and maps to 949 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316843.4	LLGL1-001	4260	1064aa	ENSP00000321537.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32586	A0PJG1 Q15334	NM_004140.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000479155.1	LLGL1-002	6004	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 4,260 bps, Translation length: 1,064 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15334

CCDS

This transcript is a member of the Human CCDS set: CCDS32586

Version

ENST00000316843.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000132067 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.