Description
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:HGNC Symbol;Acc:9245]
Gene Synonyms
LIP.1, LIP1, LIPRIN
Location
Chromosome 11: 70,116,879-70,230,493 forward strand.
About this transcript
This transcript has 29 exons, is annotated with 12 domains and features, is associated with 50910 variant alleles and maps to 964 oligo probes.
Gene
This transcript is a product of gene ENSG00000131626.11 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000253925.7 | PPFIA1-001 | 5234 | 1202aa | ENSP00000253925.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31627 | B3KVS8 E9PID5 E9PPF6 Q13136 | NM_003626.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000389547.3 | PPFIA1-002 | 4133 | 1185aa | ENSP00000374198.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31628 | E9PID5 E9PPF6 Q13136 | NM_177423.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000528750.1 | PPFIA1-018 | 1168 | 389aa | ENSP00000434445.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000528853.1 | PPFIA1-023 | 745 | 98aa | ENSP00000434692.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000530798.1 | PPFIA1-013 | 710 | 237aa | ENSP00000433114.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000530746.1 | PPFIA1-008 | 575 | 158aa | ENSP00000432722.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PID5 E9PPF6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000532024.1 | PPFIA1-009 | 563 | 99aa | ENSP00000432065.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PID5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000532504.1 | PPFIA1-003 | 5159 | 583aa | ENSP00000433619.1 | Nonsense mediated decay | E9PID5 E9PJZ7 E9PPF6 | - | - | |
| ENST00000526262.1 | PPFIA1-004 | 4537 | 387aa | ENSP00000435752.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000530294.1 | PPFIA1-017 | 977 | 55aa | ENSP00000431828.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000530390.1 | PPFIA1-021 | 879 | 46aa | ENSP00000435978.1 | Nonsense mediated decay | H0YEK0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000526347.1 | PPFIA1-016 | 862 | 61aa | ENSP00000431692.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000526369.1 | PPFIA1-014 | 564 | 97aa | ENSP00000437024.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000533894.1 | PPFIA1-019 | 553 | 33aa | ENSP00000432913.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000525922.1 | PPFIA1-025 | 358 | 48aa | ENSP00000436234.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000530548.1 | PPFIA1-006 | 3774 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000532443.1 | PPFIA1-012 | 587 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000526074.1 | PPFIA1-020 | 573 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528284.1 | PPFIA1-015 | 568 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000530932.1 | PPFIA1-010 | 536 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000531657.1 | PPFIA1-007 | 3036 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000527612.1 | PPFIA1-022 | 598 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000532793.1 | PPFIA1-024 | 550 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000525530.1 | PPFIA1-011 | 514 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |