Transcript: ENST00000427363.2 NFATC1-007

Description

nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 [Source:HGNC Symbol;Acc:7775]

Gene Synonyms

NF-ATC, NFAT2, NFATC, NFATc

Location

Chromosome 18: 77,156,225-77,287,577 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 19 domains and features, is associated with 79874 variant alleles and maps to 487 oligo probes.

Gene

This transcript is a product of gene ENSG00000131196.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253506.5	NFATC1-001	4642	825aa	ENSP00000253506.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12015	O95644	NM_006162.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000329101.4	NFATC1-009	4595	930aa	ENSP00000327850.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32850	F5H4S8 O95644	NM_172387.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000318065.5	NFATC1-003	4302	812aa	ENSP00000316553.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59327	O95644	NM_172389.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397790.2	NFATC1-002	3453	353aa	ENSP00000380892.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12016	O95644	NM_172388.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427363.2	NFATC1-007	2832	943aa	ENSP00000389377.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62467	F5H4S8 O95644	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591814.1	NFATC1-004	2807	716aa	ENSP00000466194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59326	O95644	NM_172390.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592223.1	NFATC1-011	2531	703aa	ENSP00000467181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62470	O95644	NM_001278675.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587635.1	NFATC1-005	2195	639aa	ENSP00000468111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ER53	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542384.1	NFATC1-006	2142	713aa	ENSP00000442435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62468	O95644	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586434.1	NFATC1-010	2103	700aa	ENSP00000466489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62469	O95644	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545796.1	NFATC1-201	1919	471aa	ENSP00000439992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62471	F5H4S8	NM_001278673.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590313.1	NFATC1-008	1919	71aa	ENSP00000467615.1	Nonsense mediated decay		K7EQ04	-	-
ENST00000590172.1	NFATC1-012	1668	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586695.1	NFATC1-013	1335	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590861.1	NFATC1-018	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590224.1	NFATC1-015	450	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591065.1	NFATC1-016	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591089.1	NFATC1-017	504	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,832 bps, Translation length: 943 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95644

CCDS

This transcript is a member of the Human CCDS set: CCDS62467

Version

ENST00000427363.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000450507 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000427363.2 NFATC1-007

Summary